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You isolate a prokaryote. After performing analysis on the organism, you cannot find a description matching that of your organism in the reference text Bergey's Manual of Systematic Bacteriology. This suggests that you have likely isolated a new organism.

A) True
B) False

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Modern approaches to evolutionary taxonomy often involve


A) biochemical differences.
B) comparison of DNA or RNA.
C) protein similarities.
D) lactose fermentation abilities.
E) staining techniques.

F) All of the above
G) A) and D)

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Serological methods


A) are useful in identifying bacteria.
B) rely on the specificity of an antibody-antibody interaction.
C) may be simple but are always time consuming.
D) can rarely be used to identify bacteria.
E) All of the answer choices are correct.

F) B) and C)
G) B) and E)

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The three domain classification scheme uses


A) order, phylum, class.
B) Archaea, Bacteria, Eukarya.
C) Plants, Animals, Bacteria.
D) Protista, Prokaryotae, Fungi.
E) Bacteria, Archaea, Animalia

F) C) and D)
G) A) and B)

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In a MALDI-TOF assay,


A) antibodies are used to detect specific proteins and polysaccharides, particularly those that make up surface structures.
B) a microorganism's proteins are separated and sorted by mass to generate a profile that provides a fast way to identify a colony.
C) part of a colony is transferred to a microscope slide, and a drop of hydrogen peroxide (H2O2) is added to it to test for catalase.
D) specimens are inoculated onto differential media and a set of biochemical tests are used to identify a microorganism.
E) the nucleotide sequence of ribosomal RNA molecules (rRNAs) , or the DNA that encodes them (rDNAs) , is used to identify microbes.

F) D) and E)
G) B) and C)

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Gram-positive encapsulated diplococci found in sputum are likely


A) Escherichia coli.
B) Pseudomonas aeruginosa.
C) Streptococcus pneumoniae.
D) Neisseria gonorrhea.
E) Bacillus cereus.

F) C) and D)
G) A) and E)

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Very often clinically relevant information may be obtained by examining


A) a wet mount.
B) the size and shape of the organism.
C) the sequence of proteins.
D) the transformation ability.
E) a wet mount AND the size and shape of the organism.

F) C) and D)
G) A) and D)

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All known species of bacteria are described in Bergey's Manual of Systematic Bacteriology.

A) True
B) False

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To study the phylogeny of eukaryotes,


A) 16S rRNA is used.
B) 18S rRNA is used.
C) 40S rRNA is used.
D) 80S rRNA is used.
E) 70S rRNA is used.

F) C) and D)
G) B) and D)

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E. coli is a Gram-negative bacillus that is found as intestinal normal microbiota. Which of the following would not be useful for an initial step in identifying E. coli O157:H7 strains in a stool sample?


A) Gram staining, because E. coli strains will appear identical using this approach.
B) Serology, because E. coli strains all express the same antigens.
C) Growth on selective media, because all strains of E. coli will have the same metabolic capabilities.
D) RFLPs, because E. coli strains will be identical at the genome level.
E) These methods can all be used to differentiate between E. coli strains.

F) A) and B)
G) B) and C)

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Media that change color as a result of the biochemical activity of growing bacteria


A) usually contain a pH indicator.
B) usually contain blood.
C) usually require the addition of various reagents before the color is evident.
D) contain a colorless reagent that breaks down.
E) are always selective media.

F) C) and D)
G) D) and E)

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You tell the patient that his sample contains white blood cells in which Gram-negative diplococci can be detected. Your patient asks how you obtained this result and you tell him you


A) performed a Gram stain.
B) performed an acid-fast stain.
C) cultured his discharge on Gram-positive medium.
D) cultured his discharge on Gram-negative medium.
E) performed an antibiogram.

F) B) and E)
G) C) and D)

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You have identified the causative organism of the outbreak as E. coli. In an effort to characterize the strain of the organism involved, you do different tests. The results are as follows: Gram stain-Gram-negative rods; Oxidase test-negative; Lactose fermentation-positive; Serological testing-O157:H7; Colony morphology-smooth, creamy colonies; RFLPs-E. coli O157:H7; Antibiogram-resistant to ampicillin. Which test(s) confirm the identity of the organism at the strain level?


A) Gram stain AND antibiogram
B) Serological testing AND colony morphology
C) RFLPs AND serological testing
D) Oxidase test AND RFLPs
E) Lactose fermentation AND oxidase test

F) A) and B)
G) C) and D)

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Which of the following is NOT a method used to differentiate E. coli O157:H7 from other strains based directly on genotype?


A) Fluorescence in situ hybridization (FISH)
B) Nucleic acid amplification tests (NAATs)
C) Matrix assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS)
D) 16S rRNA gene sequencing
E) Radioisotope-labeled probes or fluorescent dye-labeled probes

F) A) and B)
G) A) and C)

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Explain the difference between a biotype and a serotype.


A) A biotype is the living type of microorganism identified, while the serotype is an individual's type of blood serum.
B) A biotype is the type of biological environment a microbe will grow in, while the serotype is the type of blood serum that the microbe can grow in.
C) A biotype is the particular phenotypic traits and characteristic structures of a biological microorganism, while the serotype is the list of molecules the microbe is able to make and secrete into the serum of an infected individual.
D) A biotype is the biochemical profile of a particular microorganism, while the serotype is the difference in its surface structures/antigens that will lead to separate immune responses from an organism (characterized by presence of different antibodies in the individual's serum) .
E) There is no real difference between a biotype and a serotype. These two words mean essentially the same thing and can be used interchangeably.

F) All of the above
G) A) and B)

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Streptococcus pyogenes can be easily distinguished microscopically from other Streptococcus species.

A) True
B) False

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Which statement regarding the Gram stain is FALSE?


A) A Gram stain may give sufficient information to start appropriate antibiotic treatment-for example a Gram-positive diplococcus in sputum is likely to be Streptococcus pneumoniae.
B) A Gram stain can sometimes be used to make a diagnosis-for example a Gram-negative diplococcus in WBC from urethral discharge is Neisseria gonorrhoeae.
C) Gram staining can be used to differentiate intestinal normal microbiota from pathogens-for example differentiating E. coli from Salmonella enterica.
D) In most cases, Gram staining is not sufficient to identify an organism-for example, Gram-positive staphylococci on skin may be either S. aureus or S. epidermidis.
E) Medically important bacteria can seldom be identified by Gram staining alone-for example the throat may harbor Streptococcus pyogenes (pathogen) as well as Streptococcus species that are normal microbiota.

F) All of the above
G) B) and C)

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The three domain systems consist of Archaea, Bacteria, and Eukarya.

A) True
B) False

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Please select the FALSE statement regarding taxonomic hierarchy.


A) A species is a group of closely related strains or an organism; it is the basic unit of taxonomy.
B) A genus is a collection of related species.
C) A phylum is a collection of similar classes; it may also be called a division.
D) A domain is a collection of similar kingdoms; there are three domains: Bacteria, Archaea, and Animalia.
E) A kingdom is a group of several phyla or divisions; a collection of similar kingdoms makes up a domain.

F) A) and C)
G) B) and C)

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You are working in a clinical lab. Two E. coli samples are sent to you for analysis and you are asked to determined whether they are the same strain. You perform an antibiogram and find that the two samples exhibit the same sensitivity to the antibiotics you use in the procedure. This indicates


A) the organisms are likely the same strain but you need to confirm this with other methods.
B) the organisms are likely different strains but you need to confirm this with other methods.
C) the two organisms are not likely to be susceptible to the same bacteriophages.
D) the two organisms will show different results if they are Gram stained.
E) the organisms are the same strains but they will react differently in serology tests.

F) D) and E)
G) B) and E)

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