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What is the need for a primer in transcription?


A) It ensures the fidelity of the newly synthesized RNA strand.
B) There is none.
C) RNA polymerases requires a preexisting strand with a nucleotide having a 3' − OH.
D) RNA polymerase requires a preexisting strand with a nucleotide having a 5' − OH.

E) A) and C)
F) B) and C)

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Which of the following statements about eukaryotic and prokaryotic RNA polymerases, is false ?


A) There are 3 different RNA polymerases in eukaryotes, instead of just one.
B) Eukaryotic polymerases have the same number of subunits as prokaryotic ones.
C) Only prokaryotic polymerases use sigma factor.
D) The enzymatic mechanism is the same for both types of organisms.

E) A) and D)
F) A) and C)

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How do eukaryotic and prokaryotic RNA polymerases compare?


A) Since eukaryotic RNA polymerases are more complex, little homology has been found between the actual protein sequences in the catalytic subunits.
B) Since eukaryotic transcription is less complex than in prokaryotes, monomeric RNA polymerases are used.
C) Despite their added complexity, eukaryotic and prokaryotic RNA polymerases are generally homologous.
D) Eukaryotic and prokaryotic RNA polymerases are virtually identical.

E) B) and C)
F) A) and D)

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General transcription activation in eukaryotes requires


A) a specific enhancer common to all genes
B) a specific silencer common to all genes
C) a protein called Mediator
D) a CREB binding protein
E) none of these

F) A) and D)
G) A) and E)

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Minor differences in the consensus sequence for RNA Polymerase


A) can be exploited to vary the amount of mRNA which is synthesized from that gene.
B) dictate the direction that RNA Polymerase proceeds from the promoter.
C) dictate whether sigma ( σ ) factor is required.
D) never occur.
E) have no effect on transcription

F) A) and D)
G) A) and B)

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Which of the following is true concerning the first nucleotide incorporated into an RNA chain?


A) The first nucleotide incorporated into the RNA chain retains its 5'-triphosphate
B) The first nucleotide is always GMP
C) The first nucleotide is always cleaved off post-transcriptionally
D) The first nucleotide is always modified after transcription

E) A) and B)
F) None of the above

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The enzyme principally responsible for RNA synthesis in Escherichia coli


A) is a multisubunit enzyme
B) consists of a single polypeptide chain
C) requires Mn2+ for activity
D) requires a DNA primer

E) B) and C)
F) None of the above

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Phosphorylation of the CTD of RNA polymerase II occurs during which phase of transcription?


A) initial binding to the promoter
B) conversion from the closed complex to the open complex
C) termination of transcription
D) None of these

E) None of the above
F) C) and D)

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Polyadenylation of eukaryotic mRNA


A) occurs at the 5' end.
B) occurs at the 3' end.
C) occurs at both ends.
D) doesn't occur at all.

E) C) and D)
F) B) and C)

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Inducers for operons are often structurally related to the enzyme substrates of that operon.

A) True
B) False

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Which enzyme transcribes genes encoding tRNA in eukaryotes?


A) RNA polymerase I
B) RNA polymerase II
C) RNA polymerase III
D) Different tRNAs are transcribed by different RNA polymerases.

E) A) and C)
F) A) and B)

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In prokaryotic RNA synthesis


A) the rate of incorporation of nucleotides is constant throughout the elongation process
B) the ρ (rho) protein is always required for termination
C) a unique series of three bases leads to termination
D) inverted-repeat sequences in the DNA being transcribed can lead to termination

E) B) and C)
F) All of the above

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DNA binding domains are distinct from transcription-activation domains.

A) True
B) False

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​ Identify the part of the RNA polymerase that constitutes the operator and the promoter and modulates the production of proteins whose amino acid sequence is specified by the structural genes under their control.


A) Transcription start site
B) Termination site
C) Control site
D) Restriction site

E) A) and B)
F) A) and C)

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CREB contains the following structural motif:


A) Helix-turn-helix
B) β− barrel
C) Zinc finger
D) Leucine zipper

E) B) and C)
F) All of the above

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Which of the following correctly describes a difference between RNA & DNA polymerases?


A) RNA polymerases usually do not need a template, while DNA polymerases do.
B) DNA polymerases usually require a primer (i.e., they can only continue a strand, not start one) , while most RNA polymerases do not.
C) RNA polymerases usually synthesize introns, while DNA polymerases synthesize cistrons.
D) RNA polymerases polymerize 5' → 3', while DNA polymerases polymerize 3' → 5'.
E) None of these

F) B) and E)
G) A) and E)

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Proteins that recognize DNA with specific base sequences are


A) more likely to bind to the major groove.
B) more likely to bind to the minor groove.
C) equally likely to bind to the major or minor grooves.
D) never occur.

E) A) and D)
F) All of the above

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How do enhancers differ from promoters?


A) Enhancers do not bind RNA polymerase.
B) Enhancers include the UP element.
C) Enhancers bind the sigma ( σ ) factor.
D) There is no difference; these terms are synonymous.

E) C) and D)
F) A) and B)

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Splicing reactions for exons involve the following mechanisms, except :


A) Small nuclear RNAs
B) Ribozymes
C) Lariat mechanisms
D) Participation of special G residues
E) All of these are involved in splicing reactions

F) A) and B)
G) A) and E)

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Which ends of eukaryotic mRNA are protected from degradation?


A) 5' end only
B) 3' end only
C) Both ends
D) Neither end
E) The RNA is circular and has no ends.

F) A) and B)
G) C) and D)

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